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Figure 2 - homoplasmic_variants.txt file
#NOTE: The homoplasmic_variants.txt file has only one column with variants names (e.g MT-73) and no header. This file will be further used in the Homoplasmic variants calling step described below and also for statistical analysis.
#NOTE: The homoplasmic_variants.txt file should be uploaded into your folder (directory) in the SCC cluster.
#NOTE: Check out at the end of this section an example of how the excel file was organized in different sheets based on the QC steps (Figure 2).
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