Krembil Centre for Neuroinformatics Summer School
Solving Problems in Mental Health using Multi-Scale Computational Neuroscience
Distribution Date: June 2022
Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health
| Topic | Tutorial Videos | Online Tutorials | Prerequisit to |
|---|---|---|---|
| R | |||
| Python | Those working with imaging data | ||
| Git/Github | |||
| Linux/Bash |
| 2022 Watch Party Time | Topic | Instructor | Video | Materials |
|---|---|---|---|---|
Lecture 1: Introduction to AI Ethics | Daniel Buchman | Watch on Crowdcast | ||
Lecture 2: Fairness and Health Equity | Marta Maslej & Laura Sikstrom | Watch on Crowdcast | ||
Workshop 1: Research Design, Data Collection, Model Construction and Validation | Marta Maslej & Laura Sikstrom | Watch on Crowdcast | ||
Workshop 2: Analysis, Interpretation and Knowledge Exchange and/or Translation | Marta Maslej & Laura Sikstrom | Watch on Crowdcast |
All videos previously recorded July 6th, 2021 as part of the KCNI Summer School
Time (EST) | Session | Instructor | Video | Materials |
|---|---|---|---|---|
Lecture 1: Basics of genotype, central dogma, GWAS, and polygenic risk scores | Dan Felsky | Watch on Crowdcast | ||
Workshop 1: Intro to transcriptomic data types, including single-cell and bulk RNAseq | Dan Felsky | Watch on Crowdcast |
All videos previously recorded July 7th, 2021 as part of the KCNI Summer School
Session | Instructor | Video | Materials | |
|---|---|---|---|---|
Lecture 1: Transcriptomics at the single-cell and bulk level level | Shreejoy Tripathy | Watch on Crowdcast | ||
Workshop 1: Intro to transcriptomic data types, including single-cell and bulk RNAseq | Dan Felsky | Watch on Crowdcast | ||
Workshop 2: Explore cellular changes in major depression using bulk and single-cell RNAseq data | Dan Felsky | Watch on Crowdcast |
All videos previously recorded July 7th, 2021 as part of the KCNI Summer School
TA's: Keon Arbabi, Sonny Chen, Micaela Consens, Amin Kharaghani
Watch Party Time (EST) | Session | Instructors | Video | Materials |
|---|---|---|---|---|
Lecture 1: Simulating brain microcircuit activity in mental health | Watch on Crowdcast | |||
Lecture 2: Simulating EEG from brain microcircuits in mental health | Watch on Crowdcast | |||
Workshop 1: Simulating and analyzing spiking from neurons and microcircuits | Watch on Crowdcast | |||
Workshop 2: Simulating and analyzing EEG signals from brain microcircuits | Watch on Crowdcast |
All videos previously recorded July 8th, 2021 as part of the KCNI Summer School
Time (EST) | Session | Instructors | Video | Materials |
|---|---|---|---|---|
Lecture 1: Introduction to neuroimaging connectomics | Erin Dickie & John Griffiths | Watch on Crowdcast | ||
Workshop 1: Calculating Neuroimaging Connectomes | Erin Dickie & John Griffiths | Watch on Crowdcast |
Time (EST) | Session | Instructors | Video | Materials |
|---|---|---|---|---|
Lecture 2: Intro to whole-brain modelling (Lecture) | John Griffiths | Watch on Crowdcast | ||
Workshop 2: simulating whole-brain activity, EEG, evoked responses, brain stimulation | John Griffiths | Watch on Crowdcast |
All videos previously recorded July 9th, 2021 as part of the KCNI Summer School
Time (EST) | Session | Instructor | Video | Materials |
|---|---|---|---|---|
Lecture 1: Bayesian Models of Learning | Watch on Crowdcast | |||
Turorial 1: Hierarchical Gaussian Filter and Simulating Learners | Watch on Crowdcast | |||
Lecture 2: Computational Modelling of EEG Data | Watch on Crowdcast | |||
Tutorial 2: Single-trial EEG Modelling | Watch on Crowdcast |
TA's: Colleen Charlton, Daniel Hauke, Peter Bedford, Povilas Karvelis
Session | Instructor | Video | Materials | |
|---|---|---|---|---|
Lecture 1: Population-based resources and the BrainHealth Databank | Joanna Yu | |||
Workshop 1: Introduction to interactive methods | Daniel Felsky | |||
Lecture 2: Types of integrative research and Whole Person Modelling | Daniel Felsky | Watch on Crowdcast | ||
Workshop 2: SNF / Subtyping | Daniel Felsky | Watch on Crowdcast |